The detailed information of tRNA gene sequence


Sequence ID>WENV170021940
Genome IDBBPG01005456
Search identical group
Phylum/Class[BBPG] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 7021
End posion on genome 7109
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
aaagtaattt
tRNA gene sequence
GGAGGGGTCGGATAATGGTTATTCCAAAAGTTTGCTAAACTTTGACGGCGAAAGTCGTCT
TGTGGGTTCGAGTCCCACCCCCTCCGCCA
Downstream region at tRNA end position
tttttcaaaa
Secondary structure (Cloverleaf model)
>WENV170021940	Ser	GCT
                   t      GCCA tttttcaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C A C C C     A
      T A A        C      | | | | |     G
    G       T A G G       G T G G G     C
    G         | | |                 T T
    T       T T C C
      T A          A     GACGGCGAAAGTCGTCTT
                    A - T
                    A - T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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