The detailed information of tRNA gene sequence


Sequence ID>WENV170021945
Genome IDBBPG01005639
Search identical group
Phylum/Class[BBPG] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 297
End posion on genome 385
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
cttttcacgt
tRNA gene sequence 
GCCGAAGTGGTGGAACTGGCAGACGCGCCGGACTCAAAATCCGGTGAGGTTCACCCCTCG
TGTGGGTTCGACTCCCACCTTCGGCACCA
Downstream region at tRNA end position 
tttttatttt
Secondary structure (Cloverleaf model)
>WENV170021945	Leu	CAA
                   t      ACCA tttttatttt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T C
                    T     C A C C C     A
      C A A        G      | | | | |     G
    T       G G T G       G T G G G     C
    G         | + |                 T T
    G       A C G C
      C A G        G     TGAGGTTCACCCCTCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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