The detailed information of tRNA gene sequence


Sequence ID>WENV170021985
Genome IDBBPG01007160
Search identical group
Phylum/Class[BBPG] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1841
End posion on genome 1756
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
accacaagaa
tRNA gene sequence 
GGAGGGTTGCGATAATGGCTATTCGGCTGGTTTCGAAAACCAGTGGGAGAAATCCCTTGT
AGGTTCGAATCCTGCACCCTCCGCCA
Downstream region at tRNA end position 
gtcaggattt
Secondary structure (Cloverleaf model)
>WENV170021985	Ser	CGA
                   a      GCCA gtcaggattt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C G T C C     A
      T A A        G      | + | | |     G
    G       T A G C       G T A G G     C
    G         | | |                 T T
    C       T T C G
      T A          G     TGGGAGAAATCCCTT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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