The detailed information of tRNA gene sequence


Sequence ID>WENV170021989
Genome IDBBPG01007657
Search identical group
Phylum/Class[BBPG] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2291
End posion on genome 2203
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ataaatgtaT
tRNA gene sequence 
GGAGGAGTCGCATAATGGTATTGCAACACCCTGCTAAGGTGTGACCTCTAACAGGGTCTT
GTGGGTTCGAGTCCCACCTCCTCCGCCC
Downstream region at tRNA end position 
cccacctttt
Secondary structure (Cloverleaf model)
>WENV170021989	Ser	GCT
                   T      GCCC cccacctttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C A C C C     A
        A A        C      | | | | |     G
      T     T A C G       G T G G G     C
      G       | | |                 T T
      G     T T G C
        T A        A     GACCTCTAACAGGGTCTT
                    A - T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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