The detailed information of tRNA gene sequence


Sequence ID>WENV170022003
Genome IDBBPG01008164
Search identical group
Phylum/Class[BBPG] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 5072
End posion on genome 5159
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cccgccttcg
tRNA gene sequence 
GTCGAGGTCGCCTAGTCTGGTATGGCGCAGGTTTGCTAAACCTGTGTCCCTTTGGGACTC
GAGGGTTCAAATCCCTCCCTCGGCGTCA
Downstream region at tRNA end position 
caatgcaata
Secondary structure (Cloverleaf model)
>WENV170022003	Ser	GCT
                   g      GTCA caatgcaata
                     G - C
                     T + G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        C      | | | | |     A
    C       T C C G       G A G G G     C
    T         | | |                 T T
    G       T G G C
      G T A        G     TGTCCCTTTGGGACTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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