The detailed information of tRNA gene sequence


Sequence ID>WENV170022017
Genome IDBBPG01008727
Search identical group
Phylum/Class[BBPG] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 17
End posion on genome 104
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position
cacaaaattt
tRNA gene sequence
GGCGGGATGCCGGAGAGGATGATCGGGGTAGTTTCGAAAACTACTATACTCGAAAGAGTA
TCGGAGGTTCGAATCCTCCTCCCGCCGCgc
Downstream region at tRNA end position
aaaaaatcat
Secondary structure (Cloverleaf model)
>WENV170022017	Ser	CGA
                   t      GCgc aaaaaatcat
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C T C C     A
      A G A        G      | | | | |     G
    G       G G C C       G G A G G     C
    G       + | | |                 T T
    A       T C G G
      T G A        G     TATACTCGAAAGAGTATC
                    G - C
                    T - A
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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