The detailed information of tRNA gene sequence


Sequence ID>WENV170022040
Genome IDBBPG01010833
Search identical group
Phylum/Class[BBPG] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 953
End posion on genome 1029
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tcaaaggaac
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGTTAGAGTGTCTGCGTGGCACGCAGAAGGTCGCGAGTTCGAG
TCTCGCTGGGTCCACCA
Downstream region at tRNA end position 
taacgaattt
Secondary structure (Cloverleaf model)
>WENV170022040	Ala	GGC
                   c      ACCA taacgaattt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     C G C T C     A
      T G A        A      | | | | |     G
    T       C T C G       G C G A G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  G       C
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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