The detailed information of tRNA gene sequence


Sequence ID>WENV170022077
Genome IDBBPG01015660
Search identical group
Phylum/Class[BBPG] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 119
End posion on genome 43
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
attagagagt
tRNA gene sequence 
GGGACGGTGGTGTAGCCTGGCAGCATAACTCCCTGTCACGGAGTAGGTCGCGGGTTCAAA
TCCCGTCCGTCCCGCAA
Downstream region at tRNA end position 
aaaatcgcaa
Secondary structure (Cloverleaf model)
>WENV170022077	Asp	GTC
                   t      GCAA aaaatcgcaa
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        G      + | | | |     A
    C       T G T G       G C G G G     C
    T       + | | +                 T T
    G       G C A T
      G C A        A     AGGTC
                    A - T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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