The detailed information of tRNA gene sequence


Sequence ID>WENV170022199
Genome IDBCQK01001534
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 352
End posion on genome 443
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccaagaaaac
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCCGAAGGCGCTCCCCTGCTAAGGGAGTATGGGCTTTAACTCC
CATCGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
tttcttacta
Secondary structure (Cloverleaf model)
>WENV170022199	Ser	GCT
                   c      GCCA tttcttacta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TATGGGCTTTAACTCCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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