The detailed information of tRNA gene sequence


Sequence ID>WENV170022206
Genome IDBCQK01001614
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 3057
End posion on genome 3147
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttataagtac
tRNA gene sequence 
GGAGGCGTACTCAAGTGGTTTAAGAGAACGGTCTTGAAAACCGTCAGGCGGCGAAAGCCG
TGCGTGGGTTCGAATCCCACCGCCTCCTCCA
Downstream region at tRNA end position 
cttctttttt
Secondary structure (Cloverleaf model)
>WENV170022206	Ser	TGA
                   c      TCCA cttctttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A C C C     A
      T G A        A      | | | | |     G
    G       A C T C       G T G G G     C
    G         | | |                 T T
    T       A G A G
      T T A        A     CAGGCGGCGAAAGCCGTGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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