The detailed information of tRNA gene sequence


Sequence ID>WENV170022218
Genome IDBCQK01002105
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 2959
End posion on genome 2883
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gttatatcat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGTTGGTTCAAA
TCCAGCCCCCGCAACCA
Downstream region at tRNA end position 
attttaaact
Secondary structure (Cloverleaf model)
>WENV170022218	Met	CAT
                   t      ACCA attttaaact
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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