The detailed information of tRNA gene sequence


Sequence ID>WENV170022252
Genome IDBCQK01002823
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 2439
End posion on genome 2528
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgcgcccgca
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGCTGAACGGGACGGTCTCGAAAACCGTTGAGCGCGCAAGCGTT
CCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tgagagcagg
Secondary structure (Cloverleaf model)
>WENV170022252	Ser	CGA
                   a      GCCA tgagagcagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G A G G G     C
    G         | | |                 T T
    C       A C G G
      T G A        G     TGAGCGCGCAAGCGTTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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