The detailed information of tRNA gene sequence


Sequence ID>WENV170022311
Genome IDBCQK01004822
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 27
End posion on genome 117
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctccgccat
tRNA gene sequence 
GGTGAAGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTAAACGTTTATAGCGT
TTCGAGGGTTCGAATCCCTCTTTCACCGCCA
Downstream region at tRNA end position 
aatttgattt
Secondary structure (Cloverleaf model)
>WENV170022311	Ser	GGA
                   t      GCCA aatttgattt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     A - T
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TAAACGTTTATAGCGTTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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