The detailed information of tRNA gene sequence


Sequence ID>WENV170022330
Genome IDBCQK01005644
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 489
End posion on genome 414
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tctcggtcgt
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCGGCGGTCTCCAAAACCGTAGGTCCCGGGTTCAAGT
CCTGGTGCCCCTGCCA
Downstream region at tRNA end position 
gaccagatcg
Secondary structure (Cloverleaf model)
>WENV170022330	Trp	CCA
                   t      GCCA gaccagatcg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     G G T C C     A
      T G A        A      | | + | |     A
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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