The detailed information of tRNA gene sequence


Sequence ID>WENV170022489
Genome IDBCQK01015548
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 1228
End posion on genome 1152
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnggc
tRNA gene sequence 
GGGCCTGTAGCTCAATTGGTTAGAGCAGAGCGCTCATAACGCTTTGGTTGGGGGTTCAAG
TCCCTCCGGGCCTACCA
Downstream region at tRNA end position 
aatagcttgg
Secondary structure (Cloverleaf model)
>WENV170022489	Met	CAT
                   c      ACCA aatagcttgg
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTT
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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