The detailed information of tRNA gene sequence


Sequence ID>WENV170022554
Genome IDBCQK01019987
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 273
End posion on genome 346
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaaattataa
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGCCAATGGTTCAAA
TCCATTTCCCGCTAttt
Downstream region at tRNA end position 
gctaatacgt
Secondary structure (Cloverleaf model)
>WENV170022554	Met	CAT
                   a      Attt gctaatacgt
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     T T A C C     A
      T G A        A      | | | | |     A
    C       C G A G       A A T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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