The detailed information of tRNA gene sequence


Sequence ID>WENV170022583
Genome IDBCQK01022736
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 281
End posion on genome 369
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aggctaaact
tRNA gene sequence 
AGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTATACACCAAAAGTGT
ATCGAGGGTTCGAATCCCTTCCTCTCTGCat
Downstream region at tRNA end position 
tttattttac
Secondary structure (Cloverleaf model)
>WENV170022583	Ser	GGA
                   t      GCat tttattttac
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACACCAAAAGTGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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