The detailed information of tRNA gene sequence


Sequence ID>WENV170022604
Genome IDBCQK01025782
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 218
End posion on genome 312
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atagaggcgc
tRNA gene sequence 
GGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAATCCAGTTGGGGCCGCCAGCGG
TCCTGGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
aactttagtt
Secondary structure (Cloverleaf model)
>WENV170022604	SeC(p)	TCA
                   c      GCCA aactttagtt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     T G T C C     A
      C C T        T      + | | | |     G
    G       C T G C       G C A G G     C
    G       | + | |                 T T
    T       G G C G
      G A          G     TTGGGGCCGCCAGCGGTCCTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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