The detailed information of tRNA gene sequence


Sequence ID>WENV170022621
Genome IDBCQK01027192
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 923
End posion on genome 833
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgtcgctcgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATACGTGATAAGCGT
ATCGAGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
cagcccattg
Secondary structure (Cloverleaf model)
>WENV170022621	Ser	GCT
                   c      GCCA cagcccattg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGTGATAAGCGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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