The detailed information of tRNA gene sequence


Sequence ID>WENV170022629
Genome IDBCQK01027767
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 552
End posion on genome 627
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgcctattcg
tRNA gene sequence 
TGCAGCGTAGCTCAGTGGTTAGAGCGCGGTTCTCATAAAGCCGAGGTCGCCGGTTCAAGT
CCGGCCGCTGCAACCA
Downstream region at tRNA end position 
aatcaccatt
Secondary structure (Cloverleaf model)
>WENV170022629	Met	CAT
                   g      ACCA aatcaccatt
                     T - A
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T G
                    T     C G G C C     A
      T G A        A      | | | | |     A
    G       C T C G       G C C G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGTC
                    C - G
                    G - C
                    G - C
                    T + G
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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