The detailed information of tRNA gene sequence


Sequence ID>WENV170022646
Genome IDBCQK01030208
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 25
End posion on genome 119
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position
atcgaggcgc
tRNA gene sequence
GGAAGATCGTCATCTCCGGTGAGGTGGCTGGACTTCAAATCCAGTTGGGGACGCCAGCGT
TCCTGGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position
gttcagttcg
Secondary structure (Cloverleaf model)
>WENV170022646	SeC(p)	TCA
                   c      GCCA gttcagttcg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     T G T C C     A
      C C T        T      + | | | |     G
    G       C T A C       G C A G G     C
    G       | + | |                 T T
    T       G G T G
      G A          G     TTGGGGACGCCAGCGTTCCTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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