The detailed information of tRNA gene sequence


Sequence ID>WENV170022652
Genome IDBCQK01030800
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 461
End posion on genome 550
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcgcgtaaa
tRNA gene sequence 
GGACAGATGTCTGAGCGGTTTAAGGAGCACGCTTGGAAAGCGTGTGTAGGGGTAACTCTA
CCGTGGGTTCGAATCCCACTCTGTACGCCA
Downstream region at tRNA end position 
ttaaaaggtc
Secondary structure (Cloverleaf model)
>WENV170022652	Ser	GGA
                   a      GCCA ttaaaaggtc
                     G - C
                     G   A
                     A - T
                     C - G
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C T       G T G G G     C
    G         + | |                 T T
    T       A G G A
      T T A        G     TGTAGGGGTAACTCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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