The detailed information of tRNA gene sequence


Sequence ID>WENV170022658
Genome IDBCQK01031051
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 330
End posion on genome 417
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tccgcaacat
tRNA gene sequence 
AGAGGATTGGCAGAGTGGTAAATGCGCTCGGTTGCTAACCGAGAGTCGTTAGTTCGGCAC
AAGGGTTCGAATCCCTTATCCTCTGCAA
Downstream region at tRNA end position 
ttatttctag
Secondary structure (Cloverleaf model)
>WENV170022658	Ser	GCT
                   t      GCAA ttatttctag
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       A A G G G     C
    G         | | |                 T T
    T       A T G C
      A A          G     AGTCGTTAGTTCGGCAC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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