The detailed information of tRNA gene sequence


Sequence ID>WENV170022749
Genome IDBCQK01044214
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 445
End posion on genome 535
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cccacgcctt
tRNA gene sequence 
GGTGAAGTGTCCGAGTGGCTTAAGGAGCACGCCTGGAAAGTGTGTATACGTTTATAGCGT
ATCGAGGGTTCGAATCCCTCTTTCACCGCCA
Downstream region at tRNA end position 
aaatacattc
Secondary structure (Cloverleaf model)
>WENV170022749	Ser	GGA
                   t      GCCA aaatacattc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     A - T
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T T A        G     TATACGTTTATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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