The detailed information of tRNA gene sequence


Sequence ID>WENV170022881
Genome IDBCQK01068789
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 602
End posion on genome 514
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnntgctaa
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGCGGCTCCCTGCTAAGGAGTTATGGGGCTAATACCC
CATCGAGGGTTCGAATCCCTCCCTCTCCGtta
Downstream region at tRNA end position 
ttaatttgaa
Secondary structure (Cloverleaf model)
>WENV170022881	Ser	GCT
                   a      Gtta ttaatttgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TATGGGGCTAATACCCCATC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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