The detailed information of tRNA gene sequence


Sequence ID>WENV170022902
Genome IDBCQK01074411
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 222
End posion on genome 317
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position
ggtgacgaac
tRNA gene sequence
GGAGGTGTCCGAGTACCTGGTGGGCTCCCCCGCCTTCAAAGCGGGTGTGCGATGTGATCC
ATCGTAGGCGGGTTCGATTCCCGTCCACCTCCGCCA
Downstream region at tRNA end position
tcagaacttt
Secondary structure (Cloverleaf model)
>WENV170022902	SeC	TCA
                   c      GCCA tcagaacttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C A        C      + | | | |     G
    T       T G A G       G C G G G     C
    G       + | | |                 T T
    G       G C T C
      T G G        C     TGTGCGATGTGATCCATCGTAG
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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