The detailed information of tRNA gene sequence


Sequence ID>WENV170022982
Genome IDBCQK01095282
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 54
End posion on genome 144
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcggcgcaat
tRNA gene sequence 
GGTGAAGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTAAACGTTTATAGCGT
TTCGAGGGTTCGAATCCCTCTTTCACCGCCA
Downstream region at tRNA end position 
aattcgaagg
Secondary structure (Cloverleaf model)
>WENV170022982	Ser	GGA
                   t      GCCA aattcgaagg
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     A - T
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TAAACGTTTATAGCGTTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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