The detailed information of tRNA gene sequence


Sequence ID>WENV170023047
Genome IDBCQK01110805
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 199
End posion on genome 123
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caccaaaaat
tRNA gene sequence 
GCGGTTGTAGTTTAGCTGGTAAAAATATTCCCCTGTCACGGGAAAGACCACGGGTTCGAA
TCCCGTCAGCCGCGCCA
Downstream region at tRNA end position 
aaaaagtatt
Secondary structure (Cloverleaf model)
>WENV170023047	Asp	GTC
                   t      GCCA aaaaagtatt
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     T - A
                     G - C          T A
                    T     T G C C C     A
      C G A        A      | | | | |     G
    T       T T T G       A C G G G     C
    G       | | | +                 T T
    G       A A A T
      T A A        A     AGACC
                    T - A
                    T - A
                    C - G
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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