The detailed information of tRNA gene sequence


Sequence ID>WENV170023070
Genome IDBCQK01117409
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 303
End posion on genome 228
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caccggcctt
tRNA gene sequence 
AGGGGTATAGCTCAGCTGGTAGAGCGACGGTCTCCAAAACCGTAGGTCGCGGGTTCGAAT
CCTGCTGCCCCTGCCA
Downstream region at tRNA end position 
gcatatttta
Secondary structure (Cloverleaf model)
>WENV170023070	Trp	CCA
                   t      GCCA gcatatttta
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     C G T C C     A
      C G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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