The detailed information of tRNA gene sequence


Sequence ID>WENV170023160
Genome IDBCQK01141459
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 32
End posion on genome 108
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atagtcaata
tRNA gene sequence 
GGTCCTATAGCTCAGTTGGTTAGAGCACCTGACTCATAATCAGGTGGTCCATGGTTCGAG
TCCATGTGGGACCACAA
Downstream region at tRNA end position 
taatttggat
Secondary structure (Cloverleaf model)
>WENV170023160	Met	CAT
                   a      ACAA taatttggat
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G T A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C A T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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