The detailed information of tRNA gene sequence


Sequence ID>WENV170023305
Genome IDBCQK01210417
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 316
End posion on genome 226
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctccgccat
tRNA gene sequence 
GGTGAAGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTAAACGTTTATAGCGT
TTCGAGGGTTCGAATCCCTCTTTCACCGCCA
Downstream region at tRNA end position 
aaattttaaa
Secondary structure (Cloverleaf model)
>WENV170023305	Ser	GGA
                   t      GCCA aaattttaaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     A - T
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TAAACGTTTATAGCGTTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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