The detailed information of tRNA gene sequence


Sequence ID>ENV08002049
Genome IDABOL01033247
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 116
End posion on genome 30
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ccgcgctacc
tRNA gene sequence 
GCCCGAATGGCGAAACTGGTAGACGCATGGGACTTAAAATCCCCCGCTCGTAAGGGCGTC
CCGGTTCGATTCCGGGTTCGGGCACCA
Downstream region at tRNA end position 
tagatatcaa
Secondary structure (Cloverleaf model)
>ENV08002049	Leu	TAA
                   c      ACCA tagatatcaa
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T          T T
                    T     G G G C C     A
      C A A        G      | | | | |     G
    T       A G C G       C C C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGCTCGTAAGGGCGT
                    T   C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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