The detailed information of tRNA gene sequence


Sequence ID>WENV170023919
Genome IDBCQL01009732
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 96
End posion on genome 185
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcaacacttt
tRNA gene sequence 
GGAGAGATGGCTGAGTGGCTGAAGGCGCACGCCTGGAAAGTGTGTTTAGGTTAATCCCTA
ACGAGGGTTCGAATCCCTCTCTCTCCACCA
Downstream region at tRNA end position 
ttattctaag
Secondary structure (Cloverleaf model)
>WENV170023919	Ser	GGA
                   t      ACCA ttattctaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         + | |                 T T
    C       A G G C
      T G A        G     TTTAGGTTAATCCCTAAC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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