The detailed information of tRNA gene sequence


Sequence ID>ENV08002051
Genome IDABOL01037207
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 16
End posion on genome 91
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
accacacagc
tRNA gene sequence 
GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAAT
CCCACACGACCCACCA
Downstream region at tRNA end position 
tttttggcgg
Secondary structure (Cloverleaf model)
>ENV08002051	Lys	TTT
                   c      ACCA tttttggcgg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          T A
                    T     C A C C C     A
      T G A        A      | |   | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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