The detailed information of tRNA gene sequence


Sequence ID>WENV170023994
Genome IDBCQL01014011
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 1456
End posion on genome 1380
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcccaagga
tRNA gene sequence 
GGGCCTGTAGCTCAATTGGTTAGAGCAGAGCGCTCATAACGCTTTGGTTGCGGGTTCAAG
TCCTGCCGGGCCTACCA
Downstream region at tRNA end position 
cctccttcgt
Secondary structure (Cloverleaf model)
>WENV170023994	Met	CAT
                   a      ACCA cctccttcgt
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTT
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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