The detailed information of tRNA gene sequence


Sequence ID>WENV170024049
Genome IDBCQL01017208
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 204
End posion on genome 113
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tccgcaagac
tRNA gene sequence 
GGTGAGGTGGCCGAGAGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATACGGTTTATCCCG
TATCGAGGGTTCGAATCCCTCCTTCACCGCCA
Downstream region at tRNA end position 
ttcttgcaac
Secondary structure (Cloverleaf model)
>WENV170024049	Ser	GCT
                   c      GCCA ttcttgcaac
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGTTTATCCCGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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