The detailed information of tRNA gene sequence


Sequence ID>WENV170024240
Genome IDBCQL01032081
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 662
End posion on genome 575
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctaatctttt
tRNA gene sequence 
GGCGAGATGGCAGAGTTGGTCGATTGCGTCTGATTTGAAATCAGATGAACCTTTGCGGGT
TCCGTGGGTTCGAATCCCACTCTCGCCTtaa
Downstream region at tRNA end position 
aaactatgtt
Secondary structure (Cloverleaf model)
>WENV170024240	Ser	TGA
                   t      Ttaa aaactatgtt
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G A C G       G T G G G     C
  G         + | | |                 T T
  T         T T G C
    C G A          G     TGAACCTTTGCGGGTTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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