The detailed information of tRNA gene sequence


Sequence ID>WENV170024302
Genome IDBCQL01040890
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 21
End posion on genome 112
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgcagcactt
tRNA gene sequence 
GGAGAGGTGGCAGAGCTCGGTTTAATGCACCTGACTTGAAATCAGGCGAAGGGTCAAACC
TTCCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
agttctagaa
Secondary structure (Cloverleaf model)
>WENV170024302	Ser	TGA
                   t      GCCA agttctagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | + | | |     G
  C         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    T T T A        A     CGAAGGGTCAAACCTTCC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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