The detailed information of tRNA gene sequence


Sequence ID>ENV08002060
Genome IDABOL01052650
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 35
End posion on genome 108
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gatcgactag
tRNA gene sequence 
GCCCCCATCGTCTAGCGGCCTAGGACGCCGCCCTTTCACGGCGGTAGCACGGGTTCAAAT
CCCGTTGGGGGTACtt
Downstream region at tRNA end position 
gcaaatctca
Secondary structure (Cloverleaf model)
>ENV08002060	Glu	TTC
                   g      ACtt gcaaatctca
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
      C G A        C      | | | | |     A
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     TAGC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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