The detailed information of tRNA gene sequence


Sequence ID>WENV170024895
Genome IDBCQL01152870
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 412
End posion on genome 507
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
acttgatcgt
tRNA gene sequence 
GGAGGCGTAAGGGTGCCTGGTGGCCCCCGCGGTCTTCAAAACCGACGTGGCCGAGTACCT
CGGTCAGGCGGGTTCGATTCCCGTCCGCCTCCGCCA
Downstream region at tRNA end position 
ctnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170024895	SeC(p)	TCA
                   t      GCCA ctnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    A     T G C C C     A
      C C G        A      + | | | |     G
    T       T G G G       G C G G G     C
    G         | | |                 T T
    G       C C C C
      T G G        C     CGTGGCCGAGTACCTCGGTCAG
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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