The detailed information of tRNA gene sequence


Sequence ID>ENV08002062
Genome IDABOL01054589
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 120
End posion on genome 49
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
nnnnnnnntg
tRNA gene sequence 
GCCGGAATCGTCTAGTGGTTAGGACCCCACGTTGTGGCTGTGGTAACCTAGGTTCGAATC
CTAGTTCCGGCAacg
Downstream region at tRNA end position 
agattttttt
Secondary structure (Cloverleaf model)
>ENV08002062	His	GTG
                   g      Aacg agattttttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     G A T C C     A
      T G A        C      | | | | |     G
    G       T C T G       C T A G G     C
    G       + | | |                 T T
    T       G G A C
      T A          C     TAAC
                    C - G
                    C - G
                    A - T
                    C - G
                    G + T
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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