The detailed information of tRNA gene sequence


Sequence ID>WENV170025082
Genome IDBCQL01204827
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 254
End posion on genome 346
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aggaaatcga
tRNA gene sequence 
GGTGAGGTGGCCGAGTGGCCGAAGGCGCTCCCCTGCTAAGGGAGTATAGGGTTTGTAGCC
CTATCGAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
tcgatttcaa
Secondary structure (Cloverleaf model)
>WENV170025082	Ser	GCT
                   a      GCCA tcgatttcaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TATAGGGTTTGTAGCCCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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