The detailed information of tRNA gene sequence


Sequence ID>WENV170025111
Genome IDBCQL01220275
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 254
End posion on genome 165
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acgcggcggt
tRNA gene sequence 
GGAGACGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTAACGGGGTAACTCGT
TCGAGGGTTCGAATCCCTTCGTCTCCGCCA
Downstream region at tRNA end position 
cccaccattt
Secondary structure (Cloverleaf model)
>WENV170025111	Ser	GCT
                   t      GCCA cccaccattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAACGGGGTAACTCGTTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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