The detailed information of tRNA gene sequence


Sequence ID>WENV170025124
Genome IDBCQL01224076
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 214
End posion on genome 305
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aagaattact
tRNA gene sequence 
GGAGAGGTGCCTGAGTGGCCGAAAGGAGCGGTTTGCTAAATCGTCGTAGGTGGAAACACT
TACCCAGGGTTCGAATCCCTGTCTCTCCGCAA
Downstream region at tRNA end position 
aatatttcgc
Secondary structure (Cloverleaf model)
>WENV170025124	Ser	GCT
                   t      GCAA aatatttcgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C C       C A G G G     C
    G         | | |                 T T
    C       A A G G
      C G A        A     CGTAGGTGGAAACACTTACC
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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