The detailed information of tRNA gene sequence


Sequence ID>WENV170025159
Genome IDBCQL01235218
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 381
End posion on genome 289
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttatgcgcc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCCGAAGGCGCTCCCCTGCTAAGGGAGTATAGGGTTTGTAGCT
CTATCGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
tttattaaat
Secondary structure (Cloverleaf model)
>WENV170025159	Ser	GCT
                   c      GCCA tttattaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TATAGGGTTTGTAGCTCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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