The detailed information of tRNA gene sequence


Sequence ID>WENV170025167
Genome IDBCQL01238859
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 400
End posion on genome 325
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGTCGCTTAGCTCAGTTGGGAGAGCATCGCCCTTACAAGGCGAGGGTCACTGGTTCAAGC
CCAGTAGCGACCACCA
Downstream region at tRNA end position 
tatttaaagt
Secondary structure (Cloverleaf model)
>WENV170025167	Val	TAC
                   n      ACCA tatttaaagt
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     C - G
                     T - A          C G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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