The detailed information of tRNA gene sequence


Sequence ID>WENV170025291
Genome IDBCQL01279003
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 188
End posion on genome 264
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ataaatcgga
tRNA gene sequence 
CGCGGGATGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA
TCCAGCTCCCGCAACCA
Downstream region at tRNA end position 
atttacttgt
Secondary structure (Cloverleaf model)
>WENV170025291	Met	CAT
                   a      ACCA atttacttgt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G A C C     A
      C G A        G      | + | | |     A
    A       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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