The detailed information of tRNA gene sequence


Sequence ID>WENV170025331
Genome IDBCQL01287411
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 53
End posion on genome 145
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cccacaagac
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCCGAAGGAGCTCCCCTGCTAAGGGAGTATAGAGTTTGTAGCT
CTATCGAGGGTTCGAATCCCTCCCTCTCCACCA
Downstream region at tRNA end position 
tttcttttaa
Secondary structure (Cloverleaf model)
>WENV170025331	Ser	GCT
                   c      ACCA tttcttttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TATAGAGTTTGTAGCTCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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