The detailed information of tRNA gene sequence


Sequence ID>WENV170025452
Genome IDBCQL01346619
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 110
End posion on genome 184
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cttgttcaaT
tRNA gene sequence 
CGGTTTGTAGTTTAATTGGTAAAACATAGTTCTCATGAAGCTACCAATGTAGGTTCAAGT
CCTGCCAAACCGATta
Downstream region at tRNA end position 
atttttatcg
Secondary structure (Cloverleaf model)
>WENV170025452	Met	CAT
                   T      ATta atttttatcg
                     C - G
                     G - C
                     G - C
                     T - A
                     T - A
                     T - A
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | + | | |     A
    T       T T T G       G T A G G     C
    G       | | | |                 T T
    G       A A A C
      T A          A     CCAAT
                    T - A
                    A - T
                    G - C
                    T + G
                    T - A
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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