The detailed information of tRNA gene sequence


Sequence ID>ENV08002071
Genome IDABOL01087648
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 37
End posion on genome 111
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cacccccgct
tRNA gene sequence 
GGCCCCTTCGTCTAGCGGTTAGGACGCGGCCCTTTCACGGCTGAAGCACGGGTTCGATTC
CCGTAGGGGTCACCA
Downstream region at tRNA end position 
gctttcannn
Secondary structure (Cloverleaf model)
>ENV08002071	Glu	TTC
                   t      ACCA gctttcannn
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAGC
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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